bionic (1) imagej.1.gz

NAME

       imagej - A Java image processing program inspired by NIH Image.

SYNTAX

       imagej [option] <filename>
       imagej [-i image] [-b|-m] [arg1 ... argN]

DESCRIPTION

       Imagej  is  a  Java-based image processing program developed at the National Institutes of Health. ImageJ
       was designed with an open architecture that  provides  extensibility  via  Java  plugins  and  recordable
       macros.   Custom  acquisition,  analysis  and processing plugins can be developed using ImageJ's built-in
       editor and a Java compiler.  User-written plugins make it possible to solve  many  image  processing  and
       analysis problems, from 3-dimensional live-cell imaging,
        to  radiological  image  processing,  multiple  imaging  system data comparisons to automated hematology
       systems.  ImageJ's plugin architecture and built  in  development  environment  has  made  it  a  popular
       platform for teaching image processing.

       ImageJ  can be run as an online applet, a downloadable application, or on any computer with a Java 1.1 or
       later virtual machine.

OPTIONS

       -h     Output help information and exit.

       -o     Open images in existing ImageJ panel if one exists.

       -p <N> Open images in existing ImageJ panel number <N>.

       -x <MB>
              Set available memory.

       -c     Enable plugin compilation within imagej.

       -v     Be verbose (vv or vvv increases verbosity).

       -e Macro Code
              Execute macro code.

       -r Menu Command
              Run menu command.  Quotation marks are required around commands including spaces Commands  can  be
              sent to open ImageJ panels with the -p option.

       -b macro
              Run macro without graphics window.

       -m macro
              Run macro, image will be opened before macro is run all following arguments are passed to macro.

FILES

       Most IMAGEJ add-on are taken from $HOME/.imagej.  The  system  wide
        equivalent is in /usr/share/imagej/

        HOME/.imagej/plugins/,
              you can find and put new plugins here

        HOME/.imagej/macros/,
              you can find and put new macros here

        HOME/.imagej/luts/,
              you can find and put new look up tables here

EXAMPLES

       For compiling plugins:

       imagej -c

SEE ALSO

       The program is fully documented at https://imagej.nih.gov/ij/docs/index.html

AUTHOR

       ImageJ was written by Wayne Rasband <wsr@nih.gov>

       This  manual  page,  the  wrapper and packaging was done by Paolo Ariano <paolo.ariano@unito.it>, for the
       Debian project.