NAME

       mapsembler2_extremities - manual page for mapsembler2_extremities 2.2.4+dfsg

DESCRIPTION

       Error  :  Option  '--k' is mandatory Error : Option '--starters' is mandatory Error : Option '--reads' is
       mandatory Error : Option '--output' is mandatory USAGE for 'mapsembler2_extremities'

       --k    (1 arg) :    kmer size that will be used for mapsembler2  [default '']

       --starters
              (1 arg) :    starters fasta file  [default '']

       --reads
              (1 arg) :    reads dataset file name. Several reads sets can be provided, surrounded  by  "'s  and
              separated by a space (e.g. --reads "reads1.fa reads2.fa")  [default '']

       --output
              (1 arg) :    output substarters file name  [default '']

       --min-solid-subkmer (1 arg) :
              minimim abundance to keep a subkmer  [default '3']

       -debug (0 arg) :    debugging

       -nb-cores
              (1 arg) :    number of cores  [default '0']

       -verbose
              (1 arg) :    verbosity level  [default '1']

       -help  (0 arg) :    display help about possible options

SEE ALSO

       The  full  documentation  for mapsembler2_extremities is maintained as a Texinfo manual.  If the info and
       mapsembler2_extremities programs are properly installed at your site, the command

              info mapsembler2_extremities

       should give you access to the complete manual.

mapsembler2_extremities 2.2.4+dfsg               September 2017                       MAPSEMBLER2_EXTREMITIES(1)