NAME

       rnr-prune - prunes a list of taxa from a bootstrap tree or a single tree with branch lengths

SYNOPSIS

       rnr-prune [-i <bootTrees> | -t <treeFile>] -x <excludeFile> -n <runId> [-w <workingDir>] [-h]

DESCRIPTION

       This  program prunes a list of taxa from a bootstrap tree or a single tree with branch lengths (such as a
       best-known ML/MP-tree).

OPTIONS

   OBLIGATORY
       -x <excludeFile>
              A list of taxa (one taxon per line) to prune  from  either  the  bootstrap  trees  or  the  single
              best-known tree.

       -i <bootTrees>
              A collection of bootstrap trees.

       -t <treeFile>
              A single tree with branch lengths. Use either this flag or the -i flag.

       -n <runId>
              An identifier for this run.

   OPTIONAL
       -w <workDir>
              A working directory where output files are created.

       -h     This help file.

AUTHOR

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

rnr-prune 1.0                                      March 2017                                       RNR-PRUNE(1)