NAME

       Bio::Roary::External::Cdhit - Wrapper to run cd-hit

VERSION

       version 3.12.0

SYNOPSIS

       Wrapper to run cd-hit
          use Bio::Roary::External::Cdhit;

          my $obj = Bio::Roary::External::Cdhit->new(
            input_file   => 'abc.fa',
            exec         => 'cd-hit',
            output_base  => 'efg',
          );
         $obj->run;

AUTHOR

       Andrew J. Page <ap13@sanger.ac.uk>

COPYRIGHT AND LICENSE

       This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

       This is free software, licensed under:

         The GNU General Public License, Version 3, June 2007