NAME

       Bio::Search::Result::WABAResult - Result object for WABA alignment output

SYNOPSIS

       # use this object exactly as you would a GenericResult # the only extra method is
       query_database which is the # name of the file where the query sequence came from

DESCRIPTION

       This object is for WABA result output, there is little difference between this object and
       a GenericResult save the addition of one method query_database.  Expect many of the fields
       for GenericResult to be empty however as WABA was not intended to provide a lot of extra
       information other than the alignment.

FEEDBACK

   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send
       your comments and suggestions preferably to the Bioperl mailing list.  Your participation
       is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will
       be able look at the problem and quickly address it. Please include a thorough description
       of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
       resolution. Bug reports can be submitted via the web:

         https://github.com/bioperl/bioperl-live/issues

AUTHOR - Jason Stajich

       Email jason@bioperl.org

APPENDIX

       The rest of the documentation details each of the object methods.  Internal methods are
       usually preceded with a _

   new
        Title   : new
        Usage   : my $obj = Bio::Search::Result::WABAResult->new();
        Function: Builds a new Bio::Search::Result::WABAResult object
        Returns : Bio::Search::Result::WABAResult
        Args    : -query_database => "name of the database where the query came from"

   query_database
        Title   : query_database
        Usage   : $obj->query_database($newval)
        Function: Data field for the database filename where the
                  query sequence came from
        Returns : value of query_database
        Args    : newvalue (optional)

   All other methods are inherited from Bio::Search::Result::GenericResult
       See the Bio::Search::Result::GenericResult for complete documentation of the rest of the
       methods that are available for this module.