Provided by: libbio-perl-perl_1.7.2-2_all
NAME
Bio::Tools::Profile - parse Profile output
SYNOPSIS
use Bio::Tools::Profile; my $profile_parser = Bio::Tools::Profile->new(-fh =>$filehandle ); while( my $profile_feat = $profile_parser->next_result ) { push @profile_feat, $profile_feat; }
DESCRIPTION
Parser for Profile output
FEEDBACK
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AUTHOR - Balamurugan Kumarasamy
Email: fugui@worf.fugu-sg.org
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ new Title : new Usage : my $obj = Bio::Tools::Profile->new(); Function: Builds a new Bio::Tools::Profile object Returns : Bio::Tools::Profile Args : -filename -fh ($filehandle) next_result Title : next_result Usage : my $feat = $profile_parser->next_result Function: Get the next result set from parser data Returns : L<Bio::SeqFeature::FeaturePair> Args : none create_feature Title : create_feature Usage : my $feat= $profile_parser->create_feature($feature) Function: creates a Bio::SeqFeature::FeaturePair object Returns : L<Bio::SeqFeature::FeaturePair> Args :