Provided by: datalad_0.12.4-2_all bug

NAME

       datalad addurls - create and update a dataset from a list of URLs.

SYNOPSIS


       datalad  addurls  [-h]  [-d  DATASET] [-t TYPE] [-x REGEXP] [-m FORMAT] [--message MESSAGE] [-n] [--fast]
              [--ifexists {overwrite|skip}] [--missing-value VALUE] [--nosave] [--version-urls] [-c  PROC]  URL-
              FILE URL-FORMAT FILENAME-FORMAT

DESCRIPTION

   Format specification
       Several arguments take format strings.  These are similar to normal Python format strings where the names
       from URL-FILE (column names for a CSV or properties for JSON) are available as placeholders.  If URL-FILE
       is  a  CSV  file,  a  positional  index can also be used (i.e., "{0}" for the first column).  Note that a
       placeholder cannot contain a ':' or '!'.

       In addition, the FILENAME-FORMAT arguments has a few special placeholders.

       - _repindex

         The constructed file names must be unique across all fields rows.  To
         avoid collisions, the special placeholder "_repindex" can be added to
         the formatter.  Its value will start at 0 and increment every time a
         file name repeats.

       - _url_hostname, _urlN, _url_basename*

         Various parts of the formatted URL are available.  Take
         "http://datalad.org/asciicast/seamless_nested_repos.sh" as an example.

         "datalad.org" is stored as "_url_hostname".  Components of the URL's
         path can be referenced as "_urlN".  "_url0" and "_url1" would map to
         "asciicast" and "seamless_nested_repos.sh", respectively.  The final
         part of the path is also available as "_url_basename".

         This name is broken down further.  "_url_basename_root" and
         "_url_basename_ext" provide access to the root name and extension.
         These values are similar to the result of os.path.splitext, but, in the
         case of multiple periods, the extension is identified using the same
         length heuristic that git-annex uses.  As a result, the extension of
         "file.tar.gz" would be ".tar.gz", not ".gz".  In addition, the fields
         "_url_basename_root_py" and "_url_basename_ext_py" provide access to
         the result of os.path.splitext.

       - _url_filename*

         These are similar to _url_basename* fields, but they are obtained with
         a server request.  This is useful if the file name is set in the
         Content-Disposition header.

   Examples
       Consider a file "avatars.csv" that contains::

         who,ext,link
         neurodebian,png,https://avatars3.githubusercontent.com/u/260793
         datalad,png,https://avatars1.githubusercontent.com/u/8927200

       To download each link into a file name composed of the 'who' and 'ext' fields, we could run::

       $ datalad addurls -d avatar_ds --fast avatars.csv '{link}' '{who}.{ext}'

       The `-d avatar_ds` is used to create a new dataset in "$PWD/avatar_ds".

       If we were already in a dataset and wanted to create a new subdataset in an  "avatars"  subdirectory,  we
       could use "//" in the FILENAME-FORMAT argument::

       $ datalad addurls --fast avatars.csv '{link}' 'avatars//{who}.{ext}'

       NOTE

        For users familiar with 'git annex addurl': A large part of this
        plugin's functionality can be viewed as transforming data from
        URL-FILE into a "url filename" format that fed to 'git annex addurl
        --batch --with-files'.

OPTIONS

       URL-FILE
              A file that contains URLs or information that can be used to construct URLs. Depending on the val‐
              ue  of  --input-type,  this  should  be a CSV file (with a header as the first row) or a JSON file
              (structured as a list of objects with string values).

       URL-FORMAT
              A format string that specifies the URL for each entry.  See  the  'Format  Specification'  section
              above.

       FILENAME-FORMAT
              Like  URL-FORMAT,  but  this  format  string specifies the file to which the URL's content will be
              downloaded. The name should be a relative path and will be taken  as  relative  to  the  top-level
              dataset,  regardless of whether it is specified via --dataset) or inferred. The file name may con‐
              tain directories. The separator "//" can be used to indicate that the left-side  directory  should
              be created as a new subdataset. See the 'Format Specification' section above.

       -h, -\-help, -\-help-np
              show  this  help message. --help-np forcefully disables the use of a pager for displaying the help
              message

       -d DATASET, -\-dataset DATASET
              Add the URLs to this dataset (or possibly subdatasets of this dataset). An empty  or  non-existent
              directory  is  passed to create a new dataset. New subdatasets can be specified with FILENAME-FOR‐
              MAT. Constraints: Value must be a Dataset or a valid identifier of a Dataset (e.g. a path)

       -t TYPE, -\-input-type TYPE
              Whether URL-FILE should be considered a CSV file or a JSON file. The default value,  "ext",  means
              to  consider  URL-FILE  as a JSON file if it ends with ".json". Otherwise, treat it as a CSV file.
              Constraints: value must be one of ('ext', 'csv', 'json') [Default: 'ext']

       -x REGEXP, -\-exclude-autometa REGEXP
              By default, metadata field=value pairs are constructed with each column in URL-FILE, excluding any
              single column that is specified via URL-FORMAT. This argument can be used to exclude columns  that
              match  a  regular  expression.  If set to '*' or an empty string, automatic metadata extraction is
              disabled completely. This argument does not affect metadata set explicitly with --meta.

       -m FORMAT, -\-meta FORMAT
              A format string that specifies metadata. It should be structured as "<field>=<value>". As an exam‐
              ple, "location={3}" would mean that the value for the "location" metadata field should be set  the
              value of the fourth column. This option can be given multiple times.

       -\-message MESSAGE
              Use this message when committing the URL additions. Constraints: value must be NONE, or value must
              be a string

       -n, -\-dry-run
              Report which URLs would be downloaded to which files and then exit.

       -\-fast
              If  True,  add the URLs, but don't download their content. Underneath, this passes the --fast flag
              to `git annex addurl`.

       -\-ifexists {overwrite|skip}
              What to do if a constructed file name already exists. The default behavior is to proceed with  the
              `git  annex  addurl`,  which will fail if the file size has changed. If set to 'overwrite', remove
              the old file before adding the new one. If set to 'skip', do not add the  new  file.  Constraints:
              value must be one of (None, 'overwrite', 'skip')

       -\-missing-value VALUE
              When  an  empty string is encountered, use this value instead. Constraints: value must be NONE, or
              value must be a string

       -\-nosave
              by default all modifications to a dataset are immediately saved. Giving this option  will  disable
              this behavior.

       -\-version-urls
              Try  to  add  a  version  ID to the URL. This currently only has an effect on HTTP URLs for AWS S3
              buckets. s3:// URL versioning is not yet supported, but any URL that already contains a  "version‐
              Id=" parameter will be used as is.

       -c PROC, -\-cfg-proc PROC
              Pass this --cfg_proc value when calling CREATE to make datasets.

AUTHORS

        datalad is developed by The DataLad Team and Contributors <team@datalad.org>.

datalad addurls 0.12.4                             2020-04-06                                 datalad addurls(1)