NAME

       dotpath - Draw a non-overlapping wordmatch dotplot of two sequences

SYNOPSIS

       dotpath -asequence sequence -bsequence sequence -wordsize integer [-overlaps boolean] [-boxit boolean]
               -graph graph

       dotpath -help

DESCRIPTION

       dotpath is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
       is part of the "Alignment:Dot plots" command group(s).

OPTIONS

   Input section
       -asequence sequence

       -bsequence sequence

   Required section
       -wordsize integer
           Default value: 4

   Output section
       -overlaps boolean
           Displays the overlapping matches (in red) as well as the minimal set of non-overlapping matches
           Default value: N

       -boxit boolean
           Default value: Y

       -graph graph

BUGS

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

       dotpath is fully documented via the tfm(1) system.

AUTHOR

       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
       redistributed under the same terms as EMBOSS itself.

EMBOSS 6.4.0                                       05/11/2012                                        DOTPATH(1e)