NAME

       bedops-starch - manual page for bedops-starch 2.4.37+dfsg

DESCRIPTION

       starch

              citation: http://bioinformatics.oxfordjournals.org/content/28/14/1919.abstract

              https://doi.org/10.1093/bioinformatics/bts277

              binary  version:  2.4.37  (typical)  (creates  archive version: 2.2.0) authors:  Alex Reynolds and
              Shane Neph

       USAGE: starch [ --note="foo bar..." ]

              [ --bzip2 | --gzip ] [ --omit-signature ] [ --report-progress=N ] [ --header ]  [  <unique-tag>  ]
              <bed-file>

              *  BED  input must be sorted lexicographically (e.g., using BEDOPS sort-bed).  * Please use '-' to
              indicate reading BED data from standard input.  * Output must be directed to a  regular  file.   *
              The bzip2 compression type makes smaller archives, while gzip extracts

              faster.

              Process      Flags      --------------------------------------------------------------------------
              --note="foo bar..."   Append note to output archive metadata (optional).

       --bzip2 | --gzip
              Specify backend compression type (optional, default is bzip2).

       --omit-signature
              Skip generating  per-chromosome  data  integrity  signature  (optional,  default  is  to  generate
              signature).

       --report-progress=N
              Report compression progress every N elements per chromosome to standard error stream (optional)

       --header
              Support BED input with custom UCSC track, SAM or VCF headers, or generic comments (optional).

       <unique-tag>
              Optional. Specify unique identifier for transformed data.

       --version
              Show binary version.

       --help Show this usage message.

SEE ALSO

       The  full  documentation  for  bedops-starch  is maintained as a Texinfo manual.  If the info and bedops-
       starch programs are properly installed at your site, the command

              info bedops-starch

       should give you access to the complete manual.