NAME

       mat2dof - Matrix to degrees of freedom

SYNOPSIS

       mat2dof [options] < matrix

DESCRIPTION

       Convert transformation matrix to degrees of freedom

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Input Options
       --matrix3x3, -3
            Only input upper left 3x3 submatrix.

       --transpose, -t
            Transpose input matrix.

       --pixel-size <string>
            For  matrices  in pixel space (i.e., mapping from grid index to physical coordinate), set image grid
            pixel size.  [Default: NONE]

   Transformation Modifiers
       --center <string>
            Set center x,y,z for rotation and scaling.  [Default: NONE]

       --offset <string>
            Set offset dx,dy,dz for translation.  [Default: NONE]

       --xlate <string>
            Translate result relative by given vector.  [Default: NONE]

       --inverse
            Output inverse transformation. Inversion happens after all other modifiers have been applied.

   Output Options
       --output <string>, -o <string>
            Write output transformation to this file [Default: NONE]

       --list <string>
            Write output in list format to this archive  (directory  including  'registration'  and  'studylist'
            files).  [Default: NONE]

       --append
            Append to output file rather than create a new one and overwrite exisiting files.

AUTHORS

       Torsten  Rohlfing,  with  contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B.
       Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium  on  Alcohol  and
       Neurodevelopment  in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September
       2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.