NAME

       overlap - Overlap computation

SYNOPSIS

       overlap [options] image0 image1 [image2 ...]

DESCRIPTION

       Compute overlap measures between two or more images

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --pad-in <double>, -p <double>
            Define padding value for input images [Default: disabled]

       --mask <string>, -m <string>
            Mask file for optional region-based analysis [Default: NONE]

       --num-labels <integer>, -N <integer>
            Number of label values [default: autodetect] [Default: 0]

       --first-label <integer>, -f <integer>
            Index of first label value [default: 0]; labels below this one are ignored [Default: 0]

       --by-label
            Analysis by label, i.e., separately for each label in given (detected) range

AUTHORS

       Torsten  Rohlfing,  with  contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B.
       Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium  on  Alcohol  and
       Neurodevelopment  in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September
       2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.