NAME

       coves - produce individual RNA structure predictions for sequences

DESCRIPTION

       This  command  computes  the  score  of  each  whole sequence individually, and prints the
       scores.  You might use it to detect sequences which, according to the model, don't  belong
       to the same structural consensus; sequences which don't fit the model get negative scores.

EXAMPLES

       coves mymodel.cm seqs.fa

       coves -s mymodel.cm seqs.fa

       coves -m mymodel.cm seqs.fa

SEE ALSO

       tRNAscan-SE(1), /usr/share/doc/trnascan-se/MANUAL.gz

                                           October 2015                                  COVES(1)