download-ncbi-data

download-ncbi-data [-]pmc-oa|[-]pmc-bioc|[-]bioconcepts|[-]meshtree|[-]carotene

download-ncbi-data downloads the requested data to the current directory.

[-]pmc-oa

Download PubMed Central open-access archives in traditional format, unless already present.

[-]pmc-bioc

Download PubMed Central open-access archives in BioConcepts format, unless already present.

[-]bioconcepts

Download the BioConcepts/PubTatorCentral mapping bioconcepts2pubtatorcentral.gz, unless already present.

[-]meshtree

Download MeSH data and extract some summaries.

[-]carotene

Download and unzip sample XML for carotene.

download-pubmed(1), download-sequence(1), ftp-cp(1), ftp-ls(1), index-bioc(1), index-pubmed(1), xtract(1).