NAME

       fastq-interleave - Read 2 fastq files, and write them interleaved

SYNOPSIS

       fastq-interleave x.fastq y.fastq
       fastq-interleave x.fastq.gz y.fastq.gz

DESCRIPTION

       Read  2  fastq  files,  and write them interleaved.  Keep just the first word of header lines, and append
       "/1" and "/2" if they are otherwise identical.  Assumes 1 fastq per 4 lines, i.e. no line wrapping.