Provided by: cct_20170919+dfsg-1_all
NAME
fetch_refseq_bacterial_genomes_by_name - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences
DESCRIPTION
USAGE: fetch_refseq_bacterial_genomes_by_name -n STRING -o DIR DESCRIPTION: Downloads a GenBank record using a partial or complete bacterial species name. The --min and --max options can be used to restrict the size of the returned sequences. REQUIRED ARGUMENTS: -n, --name STRING Complete or partial name of the bacterial species. -m, --min INTEGER Records with a sequence length shorter than this value will be ignored. -x, --max INTEGER Records with a sequence length longer than this value will be ignored. -o, --output DIR The output directory to download the GenBank file into. OPTIONAL ARGUMENTS: -h, --help Show this message. EXAMPLE: fetch_refseq_bacterial_genomes_by_name -n 'Escherichia*' -o my_project/comparison_genomes
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. fetch_refseq_bacterial_genomes_by_name 2017August 2018 FETCH_REFSEQ_BACTERIAL_GENOMES_BY_NAME(1)