NAME

       pxvcf2fa - Convert vcf file to fasta.

SYNOPSIS

       pxvcf2fa [OPTION]... [FILE]...

DESCRIPTION

       Convert  vcf  file  to  fasta.  Currently only handles haploid data; phased data will come
       soon.  Can read from stdin or file.

       -s, --seqf=FILE
              input vcf file, stdin otherwise

       -o, --outf=FILE
              output fasta sequence file, stout otherwise

       -u, --uppercase
              export characters in uppercase

       -h, --help
              display this help and exit

       -V, --version
              display version and exit

REPORTING BUGS

       Report   bugs   to:   <https://github.com/FePhyFoFum/phyx/issues>    phyx    home    page:
       <https://github.com/FePhyFoFum/phyx>

AUTHOR

       This  manpage was written by Andreas Tille for the Debian distribution and can be used for
       any other usage of the program.