NAME

       surankco-training - training of random forest using contig features and contig scores

SYNOPSIS

       surankco-training [options]

DESCRIPTION

       Training of random forest using contig features from surankco-feature(1) and contig scores from surankco-
       score(1).

OPTIONS

       -f FEATURES, --features=FEATURES

              Indicate a list of surankco feature  files  (comma  separated),  correct  suffixes  are  mandatory
              ("*.features.txt")

       -d DIRECTORY, --directory=DIRECTORY

              Indicate a directory containing surankco feature files ("*.features.txt")

       -o OUTPUT.FILENAME, --output.filename=OUTPUT.FILENAME

              Indicate a name for the export of the random forest classifiers (default = "surankco_rfs.RData")

       -e EXPONENTIAL.QUANTILE, --exponential.quantile=EXPONENTIAL.QUANTILE

              Indicate an exponential distribution quantile to divide scores (default: 0.25)

       -m MANUAL.THRESHOLDS, --manual.thresholds=MANUAL.THRESHOLDS

              Indicate  manual thresholds instead of quantiles, one per score each (comma separated) in the same
              order as in the score file

       -h, --help

              Show this help message and exit

AUTHOR

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.