NAME

       ParseHeaders.py - Parses pRESTO annotations in FASTA/FASTQ sequence headers

DESCRIPTION

       usage: ParseHeaders.py [--version] [-h]  ...

       Parses pRESTO annotations in FASTA/FASTQ sequence headers

   help:
       --version
              show program's version number and exit

       -h, --help
              show this help message and exit

   subcommands:
              Annotation operation

       add    Adds field/value pairs to header annotations

       collapse
              Collapses header annotations with multiple entries

       copy   Copies header annotation fields

       delete Deletes fields from header annotations

       expand Expands annotation fields with multiple values

       merge  Merge multiple annotations fields into a single field

       rename Renames header annotation fields

       table  Writes sequence headers to a table

   output files:
              reheader-pass

              reads passing annotation operation and modified accordingly.

              reheader-fail

              raw reads failing annotation operation.

              headers

              tab delimited table of the selected annotations.

   output annotation fields:
              <user defined>

              annotation fields specified by the -f argument.

AUTHOR

        This manpage was written by Andreas Tille for the Debian distribution and
        can be used for any other usage of the program.

ParseHeaders.py 0.6.0                               May 2020                                  PARSEHEADERS.PY(1)