AssemblePairs.py
Assembles paired-end reads into a single sequence
- Provided by: presto (Version: 0.7.0-1)
- Report a bug
DESCRIPTION
usage: AssemblePairs.py [--version] [-h] ...
Assembles paired-end reads into a single sequence
help:
- --version
- show program's version number and exit
- -h, --help
- show this help message and exit
subcommands:
- Assembly method
- reference
- Assemble pairs by aligning reads against a reference database.
- sequential
- Assemble pairs by first attempting de novo assembly, then reference guided assembly.
output files:
- assemble-pass
- successfully assembled reads.
- assemble-fail
- raw reads failing paired-end assembly.
output annotation fields:
- <user defined>
- annotation fields specified by the --1f or --2f arguments.
AUTHOR
This manpage was written by Andreas Tille for the Debian
distribution and
can be used for any other usage of the program.