NAME

       Honey - genomic structural variation discovery

SYNOPSIS

       Honey {subcommand}[options]

DESCRIPTION

       PBHoney  is  an  implementation  of  two  variant-identification  approaches designed to exploit the high
       mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both  intra-read  discordance
       and soft-clipped tails of long reads to identify structural variants.

OPTIONS

       For a complete description, see the help menu

       -h, --help
              Show summary of options.

SEE ALSO

       blasr(1)
       /usr/share/doc/pbhoney/HoneyReadme.txt

                                                  February 2016                                         HONEY(1)