NAME

       Jelly - genome assembly upgrading tool

DESCRIPTION

       PBJelly  is  a highly automated pipeline that aligns long sequencing reads (such as PacBio
       RS reads or long 454 reads in fasta format) to high-confidence  draft  assembles.  PBJelly
       fills or reduces as many captured gaps as possible to produce upgraded draft genomes.

OPTIONS

       For a complete description, see the help menu

       -h, --help
              Show summary of options.

SEE ALSO

       /usr/share/doc/pbjelly/JellyReadme.txt

                                          February 2016                                  JELLY(1)