NAME

       dascrubber - alignment-based scrubbing pipeline for DNA sequencing reads

DESCRIPTION

       The  Dazzler  Scrubbing  Suite  produces  a  set of edited reads that are guaranteed to (a) be continuous
       stretches of the underlying genome (i.e. no unremoved adapters and not chimers) and (b) have no very  low
       quality  stretches  (i.e.  the error rate never exceeds some reasonable maximum, 20% or so in the case of
       Pacbio data). Its secondary goal is to do so with the minimum removal of data and splitting of reads.

OPTIONS

       For  a  complete  description  of  available  commands  and  their  options,  see  the  README  file   in
       /usr/share/doc/dascrubber/

SEE ALSO

       daligner(1), dazzdb(1).

                                                  October 2016                                     DASCRUBBER(1)