NAME

       bowtie-align-s - ultrafast memory-efficient short read aligner

DESCRIPTION

       usage: bowtie [-h] [--verbose] [--debug] [--large-index]

   optional arguments:
       -h, --help
              show this help message and exit

       --verbose

       --debug

       --large-index

       64-bit  Built on Debian-reproducible Tue, 14 Sep 2021 07:01:35 +0200 Compiler: gcc version
       11.2.0    Options:    -O3    -Wl,--hash-style=both     -DPOPCNT_CAPABILITY     -Wdate-time
       -D_FORTIFY_SOURCE=2    -g    -O2    -ffile-prefix-map=.=.   -flto=auto   -ffat-lto-objects
       -fstack-protector-strong -Wformat -Werror=format-security   -g  -O2  -ffile-prefix-map=.=.
       -flto=auto  -ffat-lto-objects  -fstack-protector-strong  -Wformat  -Werror=format-security
       -std=c++03 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now Sizeof {int,  long,
       long long, void*, size_t, off_t}: {4, 8, 8, 8, 8, 8}