NAME

       bp_extract_feature_seq - extract the corresponding sequence for a specified feature type

SYNOPSIS

       bp_extract_feature_seq [--format FORMAT] [--feature CDS] [--output FILE] [--input] FILE

DESCRIPTION

       This script will extract the sequence for all the features you specify.

OPTIONS

       -i, --input
           Specifies the sequence file to be read.

       --format
           Format of the file specified by --input. If not given, it will try to guess the
           correct format from the file extension.

       --feature
           Feature to be extracted. By default, it extracts the CDS feature.

       -o, --output
           File where the extracted features will be saved. If not specified, STDOUT is used.

FEEDBACK

   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send
       your comments and suggestions preferably to the Bioperl mailing list. Your participation
       is much appreciated.

         L<bioperl-l@bioperl.org>                  - General discussion
         L<http://bioperl.org/wiki/Mailing_lists>  - About the mailing lists

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
       resolution. Bug reports can be submitted via email or the web:

         L<https://github.com/bioperl/bioperl-live/issues>

AUTHOR

        Jason Stajich <jason-at-bioperl-dot-org>