Provided by: fabio-viewer_0.13.0+dfsg-1build1_all
NAME
eiger2crysalis - Portable image converter based on FabIO library to export Eiger frames (including te one from LImA) to a set of esperanto frames which can be imported into CrysalisPro.
DESCRIPTION
usage: eiger2crysalis [-h] [-V] [-v] [--debug] [-l] [-o OUTPUT] [-O OFFSET] [-D DUMMY] [--dry-run] [--calc-mask] [-e ENERGY] [-w WAVELENGTH] [-d DISTANCE] [-b BEAM BEAM] [--alpha ALPHA] [--kappa KAPPA] [--phi PHI] [--omega OMEGA] [--theta THETA] [--rotation ROTATION] [--transpose] [--flip-ud] [--flip-lr] [IMAGE ...] Portable image converter based on FabIO library to export Eiger frames (including te one from LImA) to a set of esperanto frames which can be imported into CrysalisPro. positional arguments: IMAGE File with input images options: -h, --help show this help message and exit -V, --version output version and exit -v, --verbose show information for each conversions --debug show debug information main arguments: -l, --list show the list of available formats and exit -o OUTPUT, --output OUTPUT output directory and filename template -O OFFSET, --offset OFFSET index offset, CrysalisPro likes indexes to start at 1, Python starts at 0 -D DUMMY, --dummy DUMMY Set masked values to this dummy value optional behaviour arguments: --dry-run do everything except modifying the file system --calc-mask Generate a mask from pixels marked as invalid. Off by default since it takes time Experimental setup options: -e ENERGY, --energy ENERGY Energy of the incident beam in keV -w WAVELENGTH, --wavelength WAVELENGTH Wavelength of the incident beam in ?? -d DISTANCE, --distance DISTANCE Detector distance in millimeters -b BEAM BEAM, --beam BEAM BEAM Direct beam in pixels x, y Goniometer setup: --alpha ALPHA Goniometer angle alpha value in deg. Constant, angle between kappa/omega. --kappa KAPPA Goniometer angle kappa value in deg or formula f(index). --phi PHI Goniometer angle phi value in deg. or formula f(index). Inner-most rotation. --omega OMEGA Goniometer angle omega value in deg. or formula f(index). Outer-most rotation. --theta THETA Goniometer angle theta value in deg. or formula f(index). Tilt angle of the detector. Image preprocessing (Important: applied in this order!): --rotation ROTATION Rotate the initial image by this value in degrees. Must be a multiple of 90??. By default 180 deg (flip_up with origin=lower and flip_lr because the image is seen from the sample). --transpose Flip the x/y axis --flip-ud Flip the image upside-down --flip-lr Flip the image left-right return codes: 0 means a success. 1 means the conversion contains a failure, 2 means there was an error in the arguments