NAME

       etandem - Finds tandem repeats in a nucleotide sequence

SYNOPSIS

       etandem -sequence sequence -minrepeat integer -maxrepeat integer -threshold integer
               -mismatch boolean -uniform boolean -outfile report -origfile outfile

       etandem -help

DESCRIPTION

       etandem is a command line program from EMBOSS (“the European Molecular Biology Open
       Software Suite”). It is part of the "Nucleic:Repeats" command group(s).

OPTIONS

   Input section
       -sequence sequence

   Required section
       -minrepeat integer
           Default value: 10

       -maxrepeat integer
           Default value: $(minrepeat)

   Advanced section
       -threshold integer
           Default value: 20

       -mismatch boolean

       -uniform boolean

   Output section
       -outfile report

       -origfile outfile

BUGS

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or
       directly to the EMBOSS developers
       (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

       etandem is fully documented via the tfm(1) system.

AUTHOR

       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package.
       It can be redistributed under the same terms as EMBOSS itself.