NAME

       eufindtRNA - detection of transfer RNA genes in genomic sequence

SYNOPSIS

       eufindtRNA [-options] <sequence file>

DESCRIPTION

       eufindtRNA 1.1, Aug 2000

       Find tRNAs in eukaryotic sequences

       Available  options:  -h              : help - print version and usage info -o <outfile>   : save tRNAs in
       <outfile> -r             : relaxed mode (no  terminators  searched  for)  -s              :  strict  mode
       (discard  tRNAs  with  missing  terminators)  -l  <length>     :  set  max  intron+variable  loop  length
       (default=140) -X <Score>     : manually set final score cutoff to <Score> (def=-31.8)  -I  <Score>      :
       set  cutoff  for  intermediate  score  (def=-31.25)  -D              :  save  tRNA  score components (for
       Debugging) -F             : don't check for uppercase or DNA alphabet -i <integer>   :  start  nucleotide
       numbering at <integer> (def=1)

AUTHOR

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.