NAME

       fastaq_enumerate_names - Renames sequences in a file, calling them 1,2,3... etc

DESCRIPTION

       usage: fastaq_enumerate_names [options] <infile> <outfile>

       Renames sequences in a file, calling them 1,2,3... etc

   positional arguments:
       infile Name of fasta/q file to be read

       outfile
              Name of output fasta/q file

   optional arguments:
       -h, --help
              show this help message and exit

       --start_index START_INDEX
              Starting number [1]

       --rename_file RENAME_FILE
              If used, will write a file of old name to new name

       --keep_suffix
              Use this to keep a /1 or /2 suffix at the end of each name

       --suffix SUFFIX
              Add the given string to the end of every name