Ubuntu Manpages

gsort

sort genomic data

gsort [--chromosomemappings CHROMOSOMEMAPPINGS] [--memory MEMORY] [--parent] PATH GENOME

a tab-delimited file to sort
a genome file of chromosome sizes and order

a file used to re-map chromosome names for example from hg19 to GRCh37
megabytes of memory to use before writing to temp files. [default: 2800]
for gff only. given rows with same chrom and start put those with a 'Parent' attribute first
display this help and exit


This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.