Provided by: genomethreader_1.7.3+dfsg-6_amd64
NAME
gthfilestat - show statistics about consensus spliced alignments
SYNOPSIS
gthfilestat [option ...] [file ...]
DESCRIPTION
Show statistics about spliced alignments in GenomeThreader output files containing intermediate results.
OPTIONS
-minalignmentscore set the minimum alignment score for spliced alignments to be included into the set of spliced alignments default: 0.00 -maxalignmentscore set the maximum alignment score for spliced alignments to be included into the set of spliced alignments default: 1.00 -mincoverage set the minimum coverage for spliced alignments to be included into the set of spliced alignments default: 0.00 -maxcoverage set the maximum coverage for spliced alignments to be included into the set of spliced alignments default: 9999.99 -v be verbose default: no -help display help and exit -version display version information and exit GTHFILESTAT(1)