NAME

       libscanout - Reads a DHF file and writes a file of top-scoring Classes, Folds and
       Superfamilies.

SYNOPSIS

       libscanout -dhfinfile infile -outfile outfile

       libscanout -help

DESCRIPTION

       libscanout is a command line program from EMBOSS (“the European Molecular Biology Open
       Software Suite”). It is part of the "Protein:3D Structure" command group(s).

OPTIONS

   Input section
       -dhfinfile infile
           This option specifies the location of the DHF file (domain hits file) (input). A
           'domain hits file' contains database hits (sequences) with domain classification
           information, in FASTA or EMBL formats. The hits are relatives to a SCOP or CATH family
           and are found from a search of a sequence database. Files containing hits retrieved by
           PSIBLAST are generated by using SEQSEARCH.

   Required section
   Output section
       -outfile outfile
           This option specifies the location of the summary file (output). The summary file
           contains lists of domain Classes, Superfamilies and Families rank-ordered on the basis
           of score (highest-scoring first).

BUGS

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or
       directly to the EMBOSS developers
       (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

       libscanout is fully documented via the tfm(1) system.

AUTHOR

       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package.
       It can be redistributed under the same terms as EMBOSS itself.