NAME

       partit2bed.pl - converts the output of the ChIP-Seq partitioning program to BED format

DESCRIPTION

              partit2bed.pl [options] <ChIP-Part out file>

              where options are:

       -h|--help
              Show this stuff

       --db <path>
              Use <path> to locate Chrom Id Storable File 'chro_idx.nstorage'

       -t|--track <track>
              BED track name [def: Test-BED]

       -d|--desc <desc>
              Description field of the BED header line [def: ChIP-Seq]

       -n <int>
              Chromosome number (BED declaration lines) [def: 0 - all chromosomes]

       -b <int>
              Chromosome start [def: -1 - entire chrom region]

       -e <int>
              Chromosome end [def: -1 - entire chrom region]

              The program converts the output of the ChIP-Seq partitioning program to BED format.

AUTHOR

        This manpage was written by Andreas Tille for the Debian distribution and
        can be used for any other usage of the program.