Provided by: lefse_1.0.8-3_all
NAME
plot_res - determine features of organisms, clades, taxonomic units, genes
SYNOPSIS
plot_res [-h] [--feature_font_size FEATURE_FONT_SIZE] [--format {png,svg,pdf}] [--dpi DPI] [--title TITLE] [--title_font_size TITLE_FONT_SIZE] [--class_legend_font_size CLASS_LEGEND_FONT_SIZE] [--width WIDTH] [--height HEIGHT] [--left_space LS] [--right_space RS] [--orientation {h,v}] [--autoscale {0,1}] [--background_color {k,w}] [--subclades N_SCL] [--max_feature_len MAX_FEATURE_LEN] [--all_feats ALL_FEATS] [--otu_only] [--report_features] INPUT_FILE OUTPUT_FILE
DESCRIPTION
Plot results
OPTIONS
positional arguments: INPUT_FILE tab delimited input file OUTPUT_FILE the file for the output image optional arguments: -h, --help show this help message and exit --feature_font_size FEATURE_FONT_SIZE the file for the output image --format {png,svg,pdf} the format for the output file --dpi DPI --title TITLE --title_font_size TITLE_FONT_SIZE --class_legend_font_size CLASS_LEGEND_FONT_SIZE --width WIDTH --height HEIGHT only for vertical histograms --left_space LS --right_space RS --orientation {h,v} --autoscale {0,1} --background_color {k,w} set the color of the background --subclades N_SCL number of label levels to be displayed (starting from the leaves, -1 means all the levels, 1 is default ) --max_feature_len MAX_FEATURE_LEN Maximum length of feature strings (def 60) --all_feats ALL_FEATS --otu_only Plot only species resolved OTUs (as opposed to all levels) --report_features Report important features to STDOUT
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.