NAME

       psw — Protein Smith-Waterman and other comparisons

SYNOPSIS

       psw [options ... ]  { seq1 seq2 }

DESCRIPTION

       psw is a short and sweet program for calculating smith waterman alginments quickly. It was
       mainly written as C driver to test the underlying code which is more useful in things like
       the Perl port.

OPTIONS

       -help     Show summary of options.

       -version  Show version of program.

SEE ALSO

       dba  (1),  dnal  (1), estwise (1), estwisedb (1), genewise (1), genewisedb (1), genomewise
       (1), promoterwise (1), pswdb (1), scanwise (1), scanwise_server (1).

AUTHOR

       This manual page was written by  Philipp  Benner  mail@philipp-benner.de  for  the  Debian
       system  (but  may  be  used  by others).  Permission is granted to copy, distribute and/or
       modify this document under the terms of the GNU General  Public  License,  Version  2  any
       later version published by the Free Software Foundation.

       On  Debian  systems,  the  complete text of the GNU General Public License can be found in
       /usr/share/common-licenses/GPL.

                                                                                           PSW(1)