NAME

       salmon - highly-accurate, transcript-level quantification estimates from RNA-seq data

SYNOPSIS

       salmon -h|--help or

DESCRIPTION

       salmon v1.4.0

              salmon  -v|--version  or  salmon -c|--cite or salmon [--no-version-check] <COMMAND>
              [-h | options]

   Commands:
       index  : create a salmon index

       quant  : quantify a sample

       alevin : single cell analysis

       swim   : perform super-secret operation

              quantmerge : merge multiple quantifications into a single file