NAME

       tradis_gene_insert_sites - Generate insertion site details from TraDIS pipeline plots

VERSION

       version 1.4.5

SYNOPSIS

DESCRIPTION

       This script is for TRADIS analysis. It takes in a plot file created by the TRADIS pathogen
       informatics pipeline, and an embl file of annotation.  It then outputs a tab delimited
       file with the insert site details. This is then used as input to an R script to calculate
       essentialit y.

NAME

       tradis_gene_insert_sites.pl

CONTACT

       path-help@sanger.ac.uk Original author: Lars Barquist

METHODS

AUTHOR

       Carla Cummins <path-help@sanger.ac.uk>

COPYRIGHT AND LICENSE

       This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

       This is free software, licensed under:

         The GNU General Public License, Version 3, June 2007