NAME

       truspades - truSPAdes genome assembler

SYNOPSIS

       truspades [options] -o <output_dir>

DESCRIPTION

       truspades is the main executable for the truSPAdes software. It assembles genomic reads given to it and
       places the resulting assembly in <output_dir>.

OPTIONS

   Basic options
       -o <output_dir>
           directory to store all the resulting files (required)

       --test
           runs truSPAdes on toy dataset

       -h/--help
           prints this usage message

       -t/--threads <int>
           number of threads

       --continue
           continue interrupted launch

       --construct-dataset
           parse dataset from input folder

   Input options
       --input-dir <directory>
           directory with input data. Note that the directory should contain only files with reads. This option
           can be used several times to provide several input directories.

       --dataset <file>:w: file with dataset description

                                                                                                    TRUSPADES(1)