NAME

       vcfanno - annotate a VCF with other VCFs/BEDs/tabixed files

DESCRIPTION

       ============================================= vcfanno version 0.3.2 [built with go1.14.4]

       see: https://github.com/brentp/vcfanno ============================================= Usage
       of vcfanno:

       -base-path string

              optional base-path to prepend to annotation files in the config

       -ends

              annotate the start and end as well as the interval itself.

       -lua string

              optional path to a file containing custom javascript functions to be used as ops

       -p int

              number of processes to use. (default 2)

       -permissive-overlap

              annotate with an overlapping variant even it doesn't share the  same  ref  and  alt
              alleles. Default is to require exact match between variants.

AUTHOR

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.