Provided by: libvcflib-tools_1.0.3+dfsg-1_amd64 bug

NAME
       vcfsamplediff


SYNOPSIS
       vcfsamplediff options [ ... ]


DESCRIPTION
       Establish  putative  somatic  variants  using  reported  differences  between germline and
       somatic samples.  Tags each record where the listed sample genotypes differ  with  .   The
       first  sample  is  assumed to be germline, the second somatic.  Each record is tagged with
       ={germline,somatic,loh} to specify the type  of  variant  given  the  genotype  difference
       between the two samples.


OPTIONS
              options:
                  -s --strict     Require that no observations in the germline support the somatic alternate.

              Type: transformation


EXIT VALUES
       0      Success

       not 0  Failure


SEE ALSO
       vcflib(1)


OTHER
LICENSE
       Copyright 2011-2022 (C) Erik Garrison and vcflib contributors.  MIT licensed.


AUTHORS
       Erik Garrison and vcflib contributors.