Provided by: bioperl_1.7.8-1_all bug


       bp_split_seq - splits a sequence into equal sized chunks with an optional
                   overlapping range


       bp_split_seq -c 10000 [-o 1000] [-i] -f


       The script will split sequences into chunks

       Mandatory Options:

         -c  Desired length of the resulting sequences.
         -f  Input file (must be FASTA format).

       Special Options:

         -o  Overlapping range between the resulting sequences.
         -i  Create an index file with the resulting sequence files. This is
             useful if you want to pass this list as input arguments into
             another programs (i.e. CLUSTAL, HMMER, etc.).


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         Ewan Birney E<lt><gt>
         Mauricio Herrera Cuadra E<lt>mauricio at intelligenomes.comE<gt>
         (some enhancements)