Provided by: cmtk_3.3.1p2+dfsg-2build1_amd64 bug


       mk_analyze_hdr - Make Analyze header file


       mk_analyze_hdr [options] [output.nii]


       Make  header  file  according  Analzye  7.5  format  based on user-supplied parameters for
       geometry, data type, orientation, etc.


   Global Toolkit Options (these are shared by all CMTK tools)
            Write list of basic command line options to standard output.

            Write complete list of basic and advanced command line options to standard output.

            Write list of command line options to standard output in MediaWiki markup.

            Write man page source in 'nroff' markup to standard output.

            Write toolkit version to standard output.

            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --dims <string>, -D <string>
            Set dimensions in voxels

       --voxel <string>, -V <string>
            Set voxel size in [mm]

       --offset <float>, -O <float>
            Binary data file offset [Default: disabled]

       --byte, -b
            8 bits, unsigned (this is the default)

       --char, -c
            8 bits, signed

       --short, -s
            16 bits, signed

       --ushort, -u
            16 bits, unsigned

       --int, -i
            32 bits signed

       --float, -f
            32 bits floating point

       --double, -d
            64 bits floating point

       --big-endian, -B
            Big endian data [This is the default]

       --little-endian, -L
            Little endian data

            Set slice orientation to axial (this is the default)

            Set slice orientation to reverse axial

            Set slice orientation to sagittal

            Set slice orientation to reverse sagittal

            Set slice orientation to corona;

            Set slice orientation to reverse coronal

            Legacy mode; do not write 'SRI1' tag into header

            Force 'SRI1' tag even if not present in imported header

       --import <string>, -I <string>
            Import data from given header file.  [Default: NONE]

       --description <string>
            Set description string [max. 80 characters] [Default: NONE]


       Torsten Rohlfing, with contributions from Michael  P.  Hasak,  Greg  Jefferis,  Calvin  R.
       Maurer, Daniel B. Russakoff, and Yaroslav Halchenko



       Report bugs at


       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on
       Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data  Integration  Component.  From
       April  2009  through September 2011, CMTK development and maintenance was supported by the
       NIBIB under Grant EB008381.