NAME

       fastaexplod - split multi sequence FastA file into one file per sequence

SYNOPSIS

       fastaexplod [options]

DESCRIPTION

       fastaexplod reads a FastA file from standard input and writes the contained sequences to a
       set of  files.  It  writes  one  sequence  per  output  file.  The  file  names  used  are
       fasta_<id>.fasta  where  id  is  a git digit running decimal number. The prefix (fasta_ by
       default) can be set using the -p switch. The .fasta suffix is omitted  if  the  data  only
       switch  is given (see below). The program writes a two column table to the standard output
       channel. The first column contains an output file  name  and  the  second  the  respective
       sequence id written to this file.

       The following options can be given

       -p<prefix>:   file   name   prefix.  The  files  will  be  called  <prefix>000000<suffix>,
       <prefix>000000<suffix><suffix>, etc. where <suffix> is .fasta unless the data only flag is
       set

       -d/--dataonly: write only the base data but no header/prolog line. This sets the file name
       suffix to the empty string.

       -s/--singleline: write a single line of base data instead of breaking the base  data  into
       multiple lines

       -L/--longname:  do  not  shorten  read names by clipping of everything starting from first
       white space

       -l<num>: set the length of the base data lines (80 by default).

       -v/--version: print the version number and quit

       -h/--help: print a help message and quit

AUTHOR

       Written by German Tischler.

REPORTING BUGS

       Report bugs to <germant@miltenyibiotec.de>

COPYRIGHT

       Copyright  ©  2009-2016  German   Tischler.    License   GPLv3+:   GNU   GPL   version   3
       <http://gnu.org/licenses/gpl.html>
       This  is free software: you are free to change and redistribute it.  There is NO WARRANTY,
       to the extent permitted by law.