Provided by: libvcflib-tools_1.0.3+dfsg-1_amd64 bug

NAME
       permuteSmooth


SYNOPSIS
       permuteSmooth -s wcFst.smooth.txt -f wcFst.txt -n 5 -s 1


DESCRIPTION
       permuteSmooth is a method for adding empirical p-values smoothed wcFst scores.


OPTIONS
              Required:
                    file:     f   -- argument: original wcFst data
                    smoothed: s   -- argument: smoothed wcFst data
                    format:   y   -- argument: [swcFst, segwcFst]
              Optional:
                    number:   n   -- argument: the number of permutations to run for each value [1000]
                    success:  u   -- argument: stop permutations after 's' successes [1]
                    success:  x   -- argument: number of threads [1]

              OUTPUT: **permuteSmooth** will append three additional columns:
                      1. The number of successes
                      2. The number of trials
                      3. The empirical p-value

              Type: statistics


EXIT VALUES
       0      Success

       not 0  Failure


SEE ALSO
       vcflib(1)


OTHER
LICENSE
       Copyright 2011-2022 (C) Erik Garrison and vcflib contributors.  MIT licensed.


AUTHORS
       Erik Garrison and vcflib contributors.