Provided by: libvcflib-tools_1.0.3+dfsg-1_amd64 bug

NAME

       vcfrandom

SYNOPSIS

       vcfrandom

DESCRIPTION

       Generate a random VCF file

EXAMPLES

              Example:

                  **vcfrandom**

              ##fileformat=VCFv4.0
              ##source=**vcfrandom**
              ##reference=/d2/data/references/build_37/human_reference_v37.fa
              ##phasing=none
              ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data">
              ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total read depth at the locus">
              ##INFO=<ID=AC,Number=1,Type=Integer,Description="Total number of alternate alleles in called genotypes">
              ##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
              ##INFO=<ID=AF,Number=1,Type=Float,Description="Estimated allele frequency in the range (0,1]">
              ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
              ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality, the Phred-scaled marginal (or unconditional) probability of the called genotype">
              ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
              #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  bill
              one     1       .       G       G,A     100     .       DP=83   GT:DP   0/1:1
              one     2       .       G       G,A     100     .       DP=3    GT:DP   0/1:49
              one     3       .       G       C,T     100     .       DP=5    GT:DP   0/1:12
              one     4       .       C       G,T     100     .       DP=51   GT:DP   0/1:60
              one     5       .       A       T,A     100     .       DP=31   GT:DP   0/1:89
              one     6       .       T       T,A     100     .       DP=56   GT:DP   0/1:60
              one     7       .       T       A,C     100     .       DP=78   GT:DP   0/1:75
              one     8       .       T       G,A     100     .       DP=73   GT:DP   0/1:78
              one     9       .       C       C,G     100     .       DP=42   GT:DP   0/1:67

              Type: statistics

EXIT VALUES

       0      Success

       not 0  Failure

SEE ALSO

       vcflib(1)

OTHER

LICENSE

       Copyright 2011-2022 (C) Erik Garrison and vcflib contributors.  MIT licensed.

AUTHORS

       Erik Garrison and vcflib contributors.