Name

       SWISS::CCcatalytic_activity

Description

       SWISS::CCcofactor represents a comment on the topic 'CATALYTIC ACTIVITY' within a Swiss-
       Prot or TrEMBL entry as specified in the user manual
       http://www.expasy.org/sprot/userman.html .  Comments on other topics are stored in other
       types of objects, such as SWISS::CC (see SWISS::CCs for more information).

       Collectively, comments of all types are stored within a SWISS::CCs container object.

Inherits from

       SWISS::BaseClass

Attributes

       topic
           The topic of this comment ('CATALYTIC ACTIVITY').

       form
           The protein form concerned by this comment (undef/empty = canonical/displayed form OR
           unknown)

       comment
           The "text" version of this comment (without evidences and new lines).

       activity_rhea
           The rhea id (e.g. RHEA:18037) of the reaction (only for new structured CC CATALYTIC
           ACTIVITY)

       activity_rhea( $new_rhea_id, $new_optional_reaction_ev )
           Set rhea activity to $new_rhea_id (and reaction ev to $new_optional_reaction_ev if
           provided) (only for new structured CC CATALYTIC ACTIVITY)

       activity_reaction
           The reaction txt (e.g. agmatine + H2O = N-carbamoylputrescine + NH4(+))

       activity_reaction( $new_reaction_txt )
           Set reaction txt to $new_reaction_txt (on old unstructured format: extra $ev could be
           added)

       activity_ec
           The reaction EC (e.g. 3.5.3.12)

       activity_ec( $new_reaction_ec, , $new_optional_reaction_ev )
           Set reaction EC to $new_reaction_ec (and reaction ev to $new_optional_reaction_ev if
           provided) (only for new structured CC CATALYTIC ACTIVITY)

       activity_participant
           The reaction participants as a String Array (e.g. [ "ChEBI:CHEBI:15377",
           "ChEBI:CHEBI:28938", "ChEBI:CHEBI:58145", "ChEBI:CHEBI:58318" ]) (participant are
           shown as dbtype:id e.g. in "ChEBI:CHEBI:15377" CheBI is db type, CHEBI:15377 is
           (CheBi) id) (only for new structured CC CATALYTIC ACTIVITY)

       activity_participant( $new_participant_array )
           Set reaction participants to $new_participant_array (array of strings) (only for new
           structured CC CATALYTIC ACTIVITY)

       directions
           The directions: Array of direction structures as hash e.g. [ { 'txt' =>
           'left-to-right', 'rhea' => 'RHEA:16846', 'ev' => '{ECO:0000269|PubMed:29420286}' } ]
           p.s. in well formed UniProtKB data 'txt' will be 'right-to-left' or 'left-to-right'
           (in that order); there should be no more than 2 directions (minimum: 0)

       direction( $new_directions )
           Set directions Array to $new_directions ...  (only for new structured CC CATALYTIC
           ACTIVITY)

       new
       fromText
       toString
           Returns a string representation of this comment.

POD ERRORS

       Hey! The above document had some coding errors, which are explained below:

       Around line 293:
           =back doesn't take any parameters, but you said =back  =head1 Methods

       Around line 347:
           =back doesn't take any parameters, but you said =back  =head2 Standard methods