Provided by: ncbi-entrez-direct_16.6.20220228+dfsg-2_amd64
NAME
fetch-pubmed - fetch records from a local NCBI PubMed archive by UID
SYNOPSIS
fetch-pubmed [-strict|-mixed] [[-path] dir] [-all] [-fresh] [-asn|-xml]
DESCRIPTION
fetch-pubmed reads a list of record IDs from standard input and prints to standard output the corresponding portions of a local NCBI PubMed archive produced by archive-pubmed(1), typically for further processing by xtract(1) or the like.
OPTIONS
-strict|-mixed Run rchive(1) with -flag strict or -flag mixed, respectively. [-path] dir Use the local archive in dir. -all Dump the entire archive. -fresh Dump the entire archive into filenames of the form pubmed001.xml.gz, using any existing such files as a starting point. -asn Retrieve ASN.1. -xml Retrieve XML (default).
ENVIRONMENT
EDIRECT_PUBMED_MASTER Local archive directory to use in the absence of -path. Expected to hold an absolute path; mandatory when not supplying a path on the command line.
SEE ALSO
archive-pubmed(1), ds2pme(1), phrase-search(1), pma2pme(1), rchive(1), stream-pubmed(1), xtract(1).