NAME

       gsort - sort genomic data

SYNOPSIS

       gsort [--chromosomemappings CHROMOSOMEMAPPINGS] [--memory MEMORY] [--parent] PATH GENOME

DESCRIPTION

   Positional arguments:
       PATH   a tab-delimited file to sort

       GENOME a genome file of chromosome sizes and order

OPTIONS

       --chromosomemappings CHROMOSOMEMAPPINGS, -c CHROMOSOMEMAPPINGS
              a file used to re-map chromosome names for example from hg19 to GRCh37

       --memory MEMORY, -m MEMORY
              megabytes of memory to use before writing to temp files. [default: 2800]

       --parent, -p
              for  gff  only.  given  rows  with  same  chrom and start put those with a 'Parent'
              attribute first

       --help, -h
              display this help and exit

AUTHOR

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.