Provided by: aevol_5.0+ds-3_amd64 bug

NAME
       Aevol - an in silico experimental evolution platform


SYNOPSIS
       aevol_misc_extract -h | --help
       aevol_misc_extract -V | --version
       aevol_misc_extract [-t TIMESTEP] [-S SEQ_FILE] [-T TRIANGLE_FILE] [-U NUM_GU] [-a]


DESCRIPTION
       Aevol  is  a  simulation  platform that allows one to let populations of digital organisms
       evolve in different conditions and study experimentally the mechanisms responsible for the
       structuration of the genome and the transcriptome.

       aevol_misc_extract
              extracts  the  genotype  and/or  data  about  the  phenotype  of individuals in the
              provided population and write them into text files easy to parse with e.g. matlab.


OPTIONS
       -h, --help
              print help, then exit

       -V, --version
              print version number, then exit

       -t TIMESTEP
              specify timestep of the individual(s) of interest

       -S SEQ_FILE
              extract sequences into file SEQ_FILE

       -T TRIANGLE_FILE
              extract phenotypic data into file TRIANGLE_FILE

       -U NUM_GU
              only treat genetic unit #NUM_GU
              default: treat all genetic units

       -a
              treat all the individuals
              default: treat only the best


SEE ALSO
       ae_misc_lineage, aevol_create, aevol_modify, aevol_propagate, aevol_run