lunar (1) mctree-mean-lengths.1.gz
NAME
tree-mean-lengths - Compute the mean lengths for branches in the given topology.
SYNOPSIS
tree-mean-lengths tree-file < in-file
DESCRIPTION
Compute the mean lengths for branches in the given topology.
ALLOWED OPTIONS:
-h, --help produce help message --tree arg tree to re-root -s arg (=0), --skip arg (=0) number of tree samples to skip -u arg, --until arg Read until this number of trees. --prune arg Comma-separated taxa to remove -x arg (=1), --subsample arg (=1) factor by which to subsample --var report standard deviation of branch lengths instead of mean --no-node-lengths ignore branches not in the specified topology --safe Don't die if no trees match the topology --drop-partial Remove partial branches --seed arg random seed -V, --verbose Output more log messages on stderr.
REPORTING BUGS:
BAli-Phy online help: <http://www.bali-phy.org/docs.php>. Please send bug reports to <bali-phy-users@googlegroups.com>.
AUTHORS
Benjamin Redelings. Feb 2018 tree-mean-lengths(1)