Provided by: mpb_1.11.1-5_amd64 bug

NAME

       mpb-data - transformations of HDF5 files output by MPB

SYNOPSIS

       mpb-data [OPTION]... [HDF5FILE]...

DESCRIPTION

       mpb-data  is  a utility to perform additional processing and transformations of HDF5 files
       output by MPB, the MIT Photonic-Bands program.  In particular, it is designed to make  the
       output  more  amenable  to  visualization  by  reformatting  it  into  a rectangular grid,
       extending it to multiple periods, and rescaling the data.

       MIT Photonic Bands (MPB) is a free program to  compute  the  band  structures  (dispersion
       relations) and electromagnetic modes of periodic dielectric structures.

       HDF5  is  a  free, portable binary format and supporting library developed by the National
       Center for Supercomputing Applications at the University of Illinois in  Urbana-Champaign.
       A  single  h5 file can contain multiple data sets; by default, mpb-data operates on all of
       the MPB-produced datasets in the file, but this can be changed via the -d  option,  or  by
       using the syntax HDF5FILE:DATASET.

       mpb-data  writes  its  output  datasets  as additional datasets in the input file(s), with
       "-new" appended to the dataset names.   Alternatively,  it  can  write  its  output  to  a
       separate file, specified by the -o option.

       Note  also  that, by default, the output datasets are identical to the input datasets; you
       must use one or more of the options below to specify a transformation (e.g. the -r/-e  and
       -n options are very useful).

OPTIONS

       -h     Display help on the command-line options and usage.

       -V     Print the version number and copyright info for mpb-data.

       -v     Verbose output.

       -o file
              Write  output  datasets  to  file  (for  the  first input file only) rather than as
              additional datasets in the input file(s) (the default).

       -r     Output a rectangular cell with the same volume as the cell of the input data.  This
              option  is  particularly useful for visualizing data from non-orthogonal unit cells
              (e.g. a triangular lattice), as otherwise the data will appear skewed or warped  in
              most  graphics programs.  This option should almost always be accompanied by the -n
              option to ensure a uniform resolution.

       -e x,y,z
              As the -r option, but also make the first  axis  of  the  output  along  the  x,y,z
              direction  (in  Cartesian coordinates) instead of along the first lattice vector as
              for -r.

       -P phaseangle
              For complex-valued datasets, this option causes the output values to be rotated  by
              phaseangle  degrees in the complex plane.  That is, they are multiplied by exp(2 pi
              i phaseangle / 360).

       -n n   Output n grid points  per  lattice  unit  ("a").   This  is  useful  not  only  for
              interpolating  to  finer  (or  coarser)  resolutions,  but  also to ensure that the
              resolution is uniform in each direction (to prevent the data from looking distorted
              when you visualize it).

       -x mx, -y my, -z mz
              This  tells  mpb-data  to  output  multiple  periods  in  the corresponding lattice
              directions.  to use a particular slice of  a  two-  or  three-dimensional  dataset.
              e.g.   -x 3.2 causes the output of 3.2 periods in the first lattice direction.  The
              default is to output only a single period.

       -m s   Output s periods in each lattice direction; equivalent to: -x s -y s -z s.

       -T     The output has the first two dimensions (x and y) transposed.  This  is  useful  in
              conjunction  with  the parallel (MPI) version of MPB, which for performance reasons
              outputs all arrays with the first two dimensions  transposed.   -T  can  undo  this
              transposition.

       -p     Pixellized output.  Normally, the input data is linearly interpolated to the output
              grid, but the -p option causes it to instead use the  nearest  grid  point  in  the
              input  data.   This is useful, for example, if you want to study the discretization
              of the dielectric-function representation.

       -d name
              Use dataset name from the input files; otherwise, the first dataset from each  file
              is  used.   Alternatively,  use  the  syntax  HDF5FILE:DATASET, which allows you to
              specify a different dataset for each file.  You can use the h5ls command  (included
              with hdf5) to find the names of datasets within a file.

              Note that this option is generally unnecessary, since mpb-data can already find the
              relevant dataset(s) for files created by MPB.  Also, note that mpb-data treats  the
              dataset  specified by this option as a real scalar dataset and does not include the
              exp(ikx) factors when extending the dataset to multiple periods.

BUGS

       Send bug reports to S. G. Johnson, stevenj@alum.mit.edu.

AUTHORS

       Written by Steven G. Johnson.  Copyright (c) 1999-2012 by the Massachusetts  Institute  of
       Technology.

SEE ALSO

       mpb(1)